Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830553.1_cds_XP_016504227.1_17691
CDS Infomation

[gene=LOC107822220] [db_xref=GeneID:107822220] [protein=pectinesterase/pectinesterase inhibitor PPE8B-like] [protein_id=XP_016504227.1] [location=join(3753..4068,5860..6459,8419..9116)] [gbkey=CDS]
Sequence

ATGGCTACTTCTTTGCCTTCGTTTTGTGGAGTGCTTCTTCTACTTTTATGTATAAGTTGT
CCTAATTTGGTGAGATGTGGGGAGGAGGATTTAAGTTTCCTTCAATCAGAGTGTTTAAAG
GTGCCAGCTTCGGAGTTTGTGGGCTCTGTTAAGTCCACCATTGACACTGTCCGTCAAGTC
ACTTCCATAGTGTCGAAATTCGTCAGCTTCTTTGGTGATTTTCGACTTTCGAATGCCATT
TCTGATTGCCTTGATCTGTTGGACCTCTCTGCAGATGAACTTACTTGGACTCTCACTGCT
TCTCAGAATCCCAAAGGGAAAAACAACAGCACAGGTAATTTAAGTGCAGATTTGAGGAAT
TATTTGAGCGGAGCACTAATTAATCAAGATACATGCATAGACGGATTTGATGGAACAAAC
GGAATTGTCAAAAACTTGGTTGCGGGAAGCCTCAACCAAGTCACTACATTAGTCCGTGAC
ATTCTTTACATGGTCCGCCCCGTCCCTAAAAACGCCCCCGGGGCCAATGACGGACGTGGA
AAACCATGGCAATGGTCCCGAGAGAGGAGGCTAACGTCAAATAAAGGACACAATAACTCA
TTCCCTTCTTGGCTTAATCGAAAAGATAGACAGTTGTTGCAATCAACTCCCAATACAGGT
GTTGTTGCGGATGTTGTAGTAGCTCTTGATGGAACGGGTAATTTTACTCGTATTAAAGAT
GCTATATCAGCAGCACCAGAATTGAGTACCAAGAGATTTGTGATACATATCAAGAAAGGT
ATTTATAACGAGTATGTGGAAATCAGCAAGAAGAAATGGAACATATTGATGATCGGTGAC
GGAATAGATGTTACTGTTATTTCTGGGAATAGAAGTTTTATTGATGGATGGACCACTTAC
AGATCTGCAACATTCGCTGTGAAAGGTCAAGGATTCATTGCACGGGACATGACATTTGAG
AACACAGCAGGACCCCAAAAGCACCAAGCCGTTGCATTTCGCTCCGACTCAGACTTGTCT
GTGTTGTTTAGATGCGCGTTGAGGGGCTACCAGGACACTCTCTACGCCCATTCTATGCGC
CAATTCTACCGAAACTGCGTAATTACTGGCACGGTAGACTTCATATTCGGAGATGGCACG
GTCGTCTTCCAAAATTGTCAAATATTGGCTCGAAAGGGACTAGCCGAACAAAAGAACACC
ATCACAGCCCAAGGCCGAAAAGAAGCTGCTGAAACTACAGGCTTCTCCATCCAATTCTCT
AATATATCTGGCGAACCAGATCTATTAGCTTCACTCAACTCTACACAAACATTCCTTGGT
AGGCCGTGGAAGGCATATTCGCGCACTGTCATAATGCAATCATACATGAGTAATGTAATT
AAACCACAGGGCTGGTTAGAGTGGAACGGTAATATATCACTTGACACATTGTACTACGCC
GAGTATCAAAATTACGGGCCCGGTGCGGGCTTGGGCGCTAGAGTCAATTGGCCTGGTTAT
CATCTACTCAATGATTCCTCACAGGCAAATAATTTCACAGTGGCTCAATTCATTTTGGGT
AACTCGTGGTTGCCTTCTACGGGAGTTAAGTACACTGCTGGTCTAGCGGTTTAA

Peptide Sequence

PEP ID

XP_016504227.1
PEP Infomation

PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Nicotiana tabacum]
Sequence

MATSLPSFCGVLLLLLCISCPNLVRCGEEDLSFLQSECLKVPASEFVGSVKSTIDTVRQV
TSIVSKFVSFFGDFRLSNAISDCLDLLDLSADELTWTLTASQNPKGKNNSTGNLSADLRN
YLSGALINQDTCIDGFDGTNGIVKNLVAGSLNQVTTLVRDILYMVRPVPKNAPGANDGRG
KPWQWSRERRLTSNKGHNNSFPSWLNRKDRQLLQSTPNTGVVADVVVALDGTGNFTRIKD
AISAAPELSTKRFVIHIKKGIYNEYVEISKKKWNILMIGDGIDVTVISGNRSFIDGWTTY
RSATFAVKGQGFIARDMTFENTAGPQKHQAVAFRSDSDLSVLFRCALRGYQDTLYAHSMR
QFYRNCVITGTVDFIFGDGTVVFQNCQILARKGLAEQKNTITAQGRKEAAETTGFSIQFS
NISGEPDLLASLNSTQTFLGRPWKAYSRTVIMQSYMSNVIKPQGWLEWNGNISLDTLYYA
EYQNYGPGAGLGARVNWPGYHLLNDSSQANNFTVAQFILGNSWLPSTGVKYTAGLAV

Transcript Sequence

Gene sequence data has not been registered.